Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 AL157791.1-201ENST00000553667 1699 ntBASIC13.63□□□□□ -0.23
EFNA3P52797 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.63□□□□□ -0.23
EFNA3P52797 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.63□□□□□ -0.23
EFNA3P52797 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.63□□□□□ -0.23
EFNA3P52797 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.63□□□□□ -0.23
EFNA3P52797 AC012618.1-201ENST00000461223 412 ntBASIC13.63□□□□□ -0.23
EFNA3P52797 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.63□□□□□ -0.23
EFNA3P52797 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.63□□□□□ -0.23
EFNA3P52797 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.63□□□□□ -0.23
EFNA3P52797 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.63□□□□□ -0.23
EFNA3P52797 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.63□□□□□ -0.23
EFNA3P52797 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
EFNA3P52797 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
EFNA3P52797 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EFNA3P52797 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.63□□□□□ -0.23
EFNA3P52797 AC011498.7-201ENST00000624986 2027 ntBASIC13.63□□□□□ -0.23
EFNA3P52797 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 LINC01165-201ENST00000445190 1623 ntBASIC13.62□□□□□ -0.23
EFNA3P52797 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 MIR769-201ENST00000390225 118 ntBASIC13.62□□□□□ -0.23
EFNA3P52797 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 PDIA3P2-201ENST00000428073 158 ntBASIC13.62□□□□□ -0.23
EFNA3P52797 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.62□□□□□ -0.23
EFNA3P52797 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 AC073150.1-201ENST00000450406 1084 ntBASIC13.62□□□□□ -0.23
EFNA3P52797 NUP210P1-202ENST00000504322 710 ntBASIC13.62□□□□□ -0.23
EFNA3P52797 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 RHOQP1-201ENST00000555758 579 ntBASIC13.62□□□□□ -0.23
EFNA3P52797 AC027237.1-201ENST00000560942 655 ntBASIC13.62□□□□□ -0.23
EFNA3P52797 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 AC100757.4-201ENST00000626934 759 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms