Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 EIF4HP1-201ENST00000453115 687 ntBASIC14.07□□□□□ -0.16
RAB28P51157 ZNF767P-206ENST00000513792 565 ntBASIC14.07□□□□□ -0.16
RAB28P51157 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 AC003686.1-201ENST00000550956 1034 ntBASIC14.07□□□□□ -0.16
RAB28P51157 AC009779.1-201ENST00000551138 283 ntBASIC14.07□□□□□ -0.16
RAB28P51157 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB28P51157 AC124068.2-201ENST00000569473 1109 ntBASIC14.07□□□□□ -0.16
RAB28P51157 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 AC104506.1-201ENST00000609247 429 ntBASIC14.07□□□□□ -0.16
RAB28P51157 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB28P51157 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB28P51157 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
RAB28P51157 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 AC138028.6-201ENST00000616106 1482 ntBASIC14.06□□□□□ -0.16
RAB28P51157 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RAB28P51157 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 XBP1P1-201ENST00000436573 652 ntBASIC14.06□□□□□ -0.16
RAB28P51157 AC011742.3-201ENST00000439053 820 ntBASIC14.06□□□□□ -0.16
RAB28P51157 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB28P51157 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB28P51157 SCARNA20.5-201ENST00000516991 142 ntBASIC14.06□□□□□ -0.16
RAB28P51157 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB28P51157 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.06□□□□□ -0.16
RAB28P51157 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 AC244093.1-201ENST00000610837 814 ntBASIC14.06□□□□□ -0.16
RAB28P51157 GPR182-203ENST00000622922 591 ntBASIC14.06□□□□□ -0.16
RAB28P51157 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB28P51157 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB28P51157 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB28P51157 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RAB28P51157 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RAB28P51157 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB28P51157 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB28P51157 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB28P51157 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms