Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 SPDYE22P-201ENST00000582158 798 ntBASIC13.85□□□□□ -0.19
CLK1P49759 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLK1P49759 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.85□□□□□ -0.19
CLK1P49759 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLK1P49759 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.85□□□□□ -0.19
CLK1P49759 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLK1P49759 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 AC055811.4-201ENST00000624039 1754 ntBASIC13.84□□□□□ -0.19
CLK1P49759 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 ACKR1-201ENST00000368121 1240 ntBASIC13.84□□□□□ -0.19
CLK1P49759 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.84□□□□□ -0.19
CLK1P49759 AL162726.2-201ENST00000438986 1017 ntBASIC13.84□□□□□ -0.19
CLK1P49759 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 AC124283.3-201ENST00000570869 594 ntBASIC13.84□□□□□ -0.19
CLK1P49759 MIR3197-201ENST00000582241 73 ntBASIC13.84□□□□□ -0.19
CLK1P49759 BX539320.1-201ENST00000623759 877 ntBASIC13.84□□□□□ -0.19
CLK1P49759 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 PRSS30P-206ENST00000641773 873 ntBASIC13.84□□□□□ -0.19
CLK1P49759 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CLK1P49759 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLK1P49759 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.84□□□□□ -0.19
CLK1P49759 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
CLK1P49759 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.83□□□□□ -0.19
CLK1P49759 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.83□□□□□ -0.19
CLK1P49759 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLK1P49759 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLK1P49759 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CLK1P49759 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.83□□□□□ -0.2
CLK1P49759 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CLK1P49759 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.83□□□□□ -0.2
CLK1P49759 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.83□□□□□ -0.2
CLK1P49759 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.83□□□□□ -0.2
CLK1P49759 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 AC098614.1-201ENST00000368528 745 ntBASIC13.83□□□□□ -0.2
CLK1P49759 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLK1P49759 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.83□□□□□ -0.2
CLK1P49759 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.83□□□□□ -0.2
CLK1P49759 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.83□□□□□ -0.2
CLK1P49759 ELK1P1-201ENST00000485699 580 ntBASIC13.83□□□□□ -0.2
CLK1P49759 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms