Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 MYO15B-237ENST00000642007 4893 ntBASIC14.53□□□□□ -0.08
CSNK1DP48730 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 AL136379.1-201ENST00000623471 2642 ntBASIC14.53□□□□□ -0.08
CSNK1DP48730 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1DP48730 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1DP48730 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1DP48730 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1DP48730 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1DP48730 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CSNK1DP48730 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.52□□□□□ -0.08
CSNK1DP48730 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1DP48730 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1DP48730 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 AC012617.1-204ENST00000586340 2305 ntBASIC14.52□□□□□ -0.08
CSNK1DP48730 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1DP48730 FRMPD2B-201ENST00000431305 1347 ntBASIC14.52□□□□□ -0.08
CSNK1DP48730 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1DP48730 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1DP48730 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1DP48730 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1DP48730 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CSNK1DP48730 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1DP48730 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1DP48730 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1DP48730 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1DP48730 Z97180.1-201ENST00000445173 988 ntBASIC14.52□□□□□ -0.09
CSNK1DP48730 RN7SL11P-201ENST00000471305 293 ntBASIC14.52□□□□□ -0.09
CSNK1DP48730 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1DP48730 AL512310.5-201ENST00000551999 515 ntBASIC14.52□□□□□ -0.09
CSNK1DP48730 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1DP48730 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1DP48730 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1DP48730 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1DP48730 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1DP48730 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1DP48730 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1DP48730 AC138627.1-207ENST00000641560 1006 ntBASIC14.52□□□□□ -0.09
CSNK1DP48730 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1DP48730 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CSNK1DP48730 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1DP48730 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1DP48730 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CSNK1DP48730 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CSNK1DP48730 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1DP48730 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1DP48730 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1DP48730 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CSNK1DP48730 HSPA7-201ENST00000445535 1927 ntBASIC14.51□□□□□ -0.09
CSNK1DP48730 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 SHMT1P1-201ENST00000419974 1312 ntBASIC14.51□□□□□ -0.09
CSNK1DP48730 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1DP48730 RNA5SP359-201ENST00000364838 113 ntBASIC14.51□□□□□ -0.09
CSNK1DP48730 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 AC103592.1-201ENST00000394513 664 ntBASIC14.51□□□□□ -0.09
CSNK1DP48730 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.51□□□□□ -0.09
CSNK1DP48730 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.51□□□□□ -0.09
CSNK1DP48730 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 AL353637.1-201ENST00000451571 732 ntBASIC14.51□□□□□ -0.09
CSNK1DP48730 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.51□□□□□ -0.09
CSNK1DP48730 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1DP48730 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms