Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.46□□□□□ -0.25
ABCD3P28288 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.46□□□□□ -0.25
ABCD3P28288 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.46□□□□□ -0.25
ABCD3P28288 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 SERPINA13P-202ENST00000478994 924 ntBASIC13.46□□□□□ -0.25
ABCD3P28288 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.46□□□□□ -0.25
ABCD3P28288 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.46□□□□□ -0.25
ABCD3P28288 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.46□□□□□ -0.25
ABCD3P28288 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.46□□□□□ -0.25
ABCD3P28288 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.46□□□□□ -0.25
ABCD3P28288 AL160314.3-201ENST00000556041 767 ntBASIC13.46□□□□□ -0.25
ABCD3P28288 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 AC008805.1-201ENST00000590892 364 ntBASIC13.46□□□□□ -0.25
ABCD3P28288 AC243960.2-201ENST00000600996 747 ntBASIC13.46□□□□□ -0.25
ABCD3P28288 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 AP000346.4-201ENST00000614827 381 ntBASIC13.46□□□□□ -0.25
ABCD3P28288 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.46□□□□□ -0.25
ABCD3P28288 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
ABCD3P28288 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ABCD3P28288 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCD3P28288 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.46□□□□□ -0.26
ABCD3P28288 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.46□□□□□ -0.26
ABCD3P28288 AC144522.1-201ENST00000625111 1658 ntBASIC13.46□□□□□ -0.26
ABCD3P28288 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCD3P28288 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCD3P28288 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCD3P28288 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCD3P28288 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCD3P28288 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.46□□□□□ -0.26
ABCD3P28288 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.46□□□□□ -0.26
ABCD3P28288 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.46□□□□□ -0.26
ABCD3P28288 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 RN7SL832P-201ENST00000607781 1756 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 AC007191.1-201ENST00000623179 2995 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
ABCD3P28288 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ABCD3P28288 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ABCD3P28288 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCD3P28288 AC006122.1-201ENST00000493323 440 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 AC106794.1-201ENST00000506935 792 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCD3P28288 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCD3P28288 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
ABCD3P28288 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCD3P28288 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCD3P28288 RN7SL163P-201ENST00000583100 276 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 AC004923.1-202ENST00000642106 209 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCD3P28288 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 AC011498.7-201ENST00000624986 2027 ntBASIC13.45□□□□□ -0.26
ABCD3P28288 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCD3P28288 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms