Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 AC015909.5-201ENST00000624336 2266 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 AL138725.1-201ENST00000407347 1314 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CAPN3P20807 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CAPN3P20807 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.11□□□□□ -0.15
CAPN3P20807 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.11□□□□□ -0.15
CAPN3P20807 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.11□□□□□ -0.15
CAPN3P20807 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.11□□□□□ -0.15
CAPN3P20807 AC114812.1-204ENST00000449669 728 ntBASIC14.11□□□□□ -0.15
CAPN3P20807 AC119751.2-201ENST00000504529 210 ntBASIC14.11□□□□□ -0.15
CAPN3P20807 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.11□□□□□ -0.15
CAPN3P20807 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.11□□□□□ -0.15
CAPN3P20807 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.11□□□□□ -0.15
CAPN3P20807 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.11□□□□□ -0.15
CAPN3P20807 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.11□□□□□ -0.15
CAPN3P20807 MIR6775-201ENST00000617557 69 ntBASIC14.11□□□□□ -0.15
CAPN3P20807 MIR6869-201ENST00000619434 62 ntBASIC14.11□□□□□ -0.15
CAPN3P20807 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.11□□□□□ -0.15
CAPN3P20807 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CAPN3P20807 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPN3P20807 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CAPN3P20807 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CAPN3P20807 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 RN7SKP230-201ENST00000365642 335 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 C1QBPP1-201ENST00000400117 770 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 AC134915.1-201ENST00000426461 574 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPN3P20807 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms