Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MEX3B-202ENST00000558133 4333 ntBASIC14.71□□□□□ -0.05
KRT4P19013 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
KRT4P19013 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
KRT4P19013 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
KRT4P19013 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.71□□□□□ -0.05
KRT4P19013 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
KRT4P19013 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.71□□□□□ -0.05
KRT4P19013 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.71□□□□□ -0.05
KRT4P19013 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.71□□□□□ -0.05
KRT4P19013 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.71□□□□□ -0.05
KRT4P19013 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
KRT4P19013 AC004466.1-201ENST00000599515 1080 ntBASIC14.71□□□□□ -0.05
KRT4P19013 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.71□□□□□ -0.05
KRT4P19013 AL390955.2-201ENST00000603032 514 ntBASIC14.71□□□□□ -0.05
KRT4P19013 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.71□□□□□ -0.05
KRT4P19013 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
KRT4P19013 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
KRT4P19013 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT4P19013 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT4P19013 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT4P19013 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT4P19013 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT4P19013 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KRT4P19013 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
KRT4P19013 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
KRT4P19013 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT4P19013 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.7□□□□□ -0.06
KRT4P19013 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
KRT4P19013 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.7□□□□□ -0.06
KRT4P19013 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
KRT4P19013 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 AC134915.1-201ENST00000426461 574 ntBASIC14.7□□□□□ -0.06
KRT4P19013 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 AC067863.1-201ENST00000494933 530 ntBASIC14.7□□□□□ -0.06
KRT4P19013 TPRX2P-201ENST00000535362 881 ntBASIC14.7□□□□□ -0.06
KRT4P19013 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
KRT4P19013 AC104794.3-201ENST00000566840 1248 ntBASIC14.7□□□□□ -0.06
KRT4P19013 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
KRT4P19013 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 AC083964.2-201ENST00000623988 2396 ntBASIC14.7□□□□□ -0.06
KRT4P19013 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
KRT4P19013 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.7□□□□□ -0.06
KRT4P19013 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KRT4P19013 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
KRT4P19013 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT4P19013 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
KRT4P19013 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT4P19013 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT4P19013 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT4P19013 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT4P19013 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT4P19013 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT4P19013 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
KRT4P19013 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
KRT4P19013 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
KRT4P19013 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.69□□□□□ -0.06
KRT4P19013 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms