Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.28■□□□□ 0.2
HOXC6P09630 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 AC093826.1-201ENST00000508655 993 ntBASIC16.28■□□□□ 0.2
HOXC6P09630 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXC6P09630 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 AC226150.1-201ENST00000544259 466 ntBASIC16.28■□□□□ 0.2
HOXC6P09630 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HOXC6P09630 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXC6P09630 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXC6P09630 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 DBET-201ENST00000630918 3363 ntBASIC16.28■□□□□ 0.2
HOXC6P09630 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXC6P09630 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXC6P09630 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.27■□□□□ 0.2
HOXC6P09630 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC6P09630 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.27■□□□□ 0.2
HOXC6P09630 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 SCARNA12-201ENST00000459155 270 ntBASIC16.27■□□□□ 0.2
HOXC6P09630 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.27■□□□□ 0.2
HOXC6P09630 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC6P09630 DNM1P51-201ENST00000558149 522 ntBASIC16.27■□□□□ 0.2
HOXC6P09630 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HOXC6P09630 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC6P09630 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC6P09630 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC6P09630 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC6P09630 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 LINC00244-201ENST00000625073 613 ntBASIC16.27■□□□□ 0.2
HOXC6P09630 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HOXC6P09630 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC6P09630 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXC6P09630 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXC6P09630 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC6P09630 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC6P09630 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.27■□□□□ 0.19
HOXC6P09630 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC6P09630 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.27■□□□□ 0.19
HOXC6P09630 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HOXC6P09630 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC6P09630 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HOXC6P09630 FER1L4-210ENST00000615531 5998 ntBASIC16.27■□□□□ 0.19
HOXC6P09630 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC6P09630 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HOXC6P09630 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
HOXC6P09630 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
HOXC6P09630 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.27■□□□□ 0.19
HOXC6P09630 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 RNVU1-8-201ENST00000364272 125 ntBASIC16.26■□□□□ 0.19
HOXC6P09630 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC6P09630 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HOXC6P09630 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC6P09630 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC6P09630 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC6P09630 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.26■□□□□ 0.19
HOXC6P09630 GNG10P1-201ENST00000452289 199 ntBASIC16.26■□□□□ 0.19
HOXC6P09630 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.26■□□□□ 0.19
HOXC6P09630 RN7SL767P-201ENST00000493013 295 ntBASIC16.26■□□□□ 0.19
HOXC6P09630 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.26■□□□□ 0.19
HOXC6P09630 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC6P09630 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms