Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CD48P09326 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.11■□□□□ 0.01
CD48P09326 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.11■□□□□ 0.01
CD48P09326 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.11■□□□□ 0.01
CD48P09326 AL645933.1-201ENST00000440087 609 ntBASIC15.11■□□□□ 0.01
CD48P09326 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.11■□□□□ 0.01
CD48P09326 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.11■□□□□ 0.01
CD48P09326 KLF2P1-201ENST00000447438 1042 ntBASIC15.11■□□□□ 0.01
CD48P09326 AC104989.1-201ENST00000519711 778 ntBASIC15.11■□□□□ 0.01
CD48P09326 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.11■□□□□ 0.01
CD48P09326 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.11■□□□□ 0.01
CD48P09326 AC005586.2-201ENST00000563946 837 ntBASIC15.11■□□□□ 0.01
CD48P09326 MIR4741-201ENST00000579822 90 ntBASIC15.11■□□□□ 0.01
CD48P09326 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.11■□□□□ 0.01
CD48P09326 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 AC079781.5-202ENST00000641784 3743 ntBASIC15.11■□□□□ 0.01
CD48P09326 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CD48P09326 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.11■□□□□ 0.01
CD48P09326 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 LINC02486-201ENST00000604157 3000 ntBASIC15.11■□□□□ 0.01
CD48P09326 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.11■□□□□ 0.01
CD48P09326 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD48P09326 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CD48P09326 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.1■□□□□ 0.01
CD48P09326 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.1■□□□□ 0.01
CD48P09326 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 AC244394.1-201ENST00000435000 1665 ntBASIC15.1■□□□□ 0.01
CD48P09326 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CD48P09326 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.1■□□□□ 0.01
CD48P09326 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 HLA-V-201ENST00000429037 534 ntBASIC15.1■□□□□ 0.01
CD48P09326 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.1■□□□□ 0.01
CD48P09326 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.1■□□□□ 0.01
CD48P09326 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CD48P09326 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 AC023310.1-201ENST00000554836 735 ntBASIC15.1■□□□□ 0.01
CD48P09326 DUX4L46-201ENST00000566845 751 ntBASIC15.1■□□□□ 0.01
CD48P09326 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CD48P09326 AC009955.4-201ENST00000597192 544 ntBASIC15.1■□□□□ 0.01
CD48P09326 AC104506.1-201ENST00000609247 429 ntBASIC15.1■□□□□ 0.01
CD48P09326 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 AL008718.2-201ENST00000609206 1313 ntBASIC15.1■□□□□ 0.01
CD48P09326 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.1■□□□□ 0.01
CD48P09326 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CD48P09326 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD48P09326 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.1■□□□□ 0.01
CD48P09326 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.09■□□□□ 0.01
CD48P09326 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.09■□□□□ 0.01
CD48P09326 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CD48P09326 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CD48P09326 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms