Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE3O75131 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE3O75131 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CPNE3O75131 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE3O75131 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE3O75131 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE3O75131 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.12□□□□□ -0.15
CPNE3O75131 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CPNE3O75131 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CPNE3O75131 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CPNE3O75131 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE3O75131 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE3O75131 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE3O75131 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE3O75131 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE3O75131 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE3O75131 AL021578.1-201ENST00000613646 709 ntBASIC14.11□□□□□ -0.15
CPNE3O75131 AL136295.7-201ENST00000619226 1200 ntBASIC14.11□□□□□ -0.15
CPNE3O75131 AC091544.8-201ENST00000619490 361 ntBASIC14.11□□□□□ -0.15
CPNE3O75131 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.11□□□□□ -0.15
CPNE3O75131 AC004923.1-202ENST00000642106 209 ntBASIC14.11□□□□□ -0.15
CPNE3O75131 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CPNE3O75131 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE3O75131 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.11□□□□□ -0.15
CPNE3O75131 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE3O75131 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CPNE3O75131 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE3O75131 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CPNE3O75131 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.1□□□□□ -0.15
CPNE3O75131 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 DPM3-202ENST00000368399 517 ntBASIC14.1□□□□□ -0.15
CPNE3O75131 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CPNE3O75131 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE3O75131 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE3O75131 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE3O75131 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE3O75131 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE3O75131 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE3O75131 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms