Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
MSI1O43347 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.13■□□□□ 0.01
MSI1O43347 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.13■□□□□ 0.01
MSI1O43347 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.13■□□□□ 0.01
MSI1O43347 CYP46A4P-201ENST00000414953 267 ntBASIC15.13■□□□□ 0.01
MSI1O43347 AC011742.3-201ENST00000439053 820 ntBASIC15.13■□□□□ 0.01
MSI1O43347 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.13■□□□□ 0.01
MSI1O43347 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.13■□□□□ 0.01
MSI1O43347 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MSI1O43347 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.13■□□□□ 0.01
MSI1O43347 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
MSI1O43347 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.13■□□□□ 0.01
MSI1O43347 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MSI1O43347 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.13■□□□□ 0.01
MSI1O43347 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MSI1O43347 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 AC023908.3-201ENST00000564211 3047 ntBASIC15.12■□□□□ 0.01
MSI1O43347 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 RN7SL832P-201ENST00000607781 1756 ntBASIC15.12■□□□□ 0.01
MSI1O43347 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MSI1O43347 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 BCYRN1-201ENST00000418539 200 ntBASIC15.12■□□□□ 0.01
MSI1O43347 OR2R1P-201ENST00000441404 914 ntBASIC15.12■□□□□ 0.01
MSI1O43347 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.12■□□□□ 0.01
MSI1O43347 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 AL157813.1-201ENST00000612996 587 ntBASIC15.12■□□□□ 0.01
MSI1O43347 AC091544.8-201ENST00000619490 361 ntBASIC15.12■□□□□ 0.01
MSI1O43347 AL805961.1-203ENST00000641078 1258 ntBASIC15.12■□□□□ 0.01
MSI1O43347 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.12■□□□□ 0.01
MSI1O43347 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
MSI1O43347 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 TUBBP5-203ENST00000508529 1334 ntBASIC15.12■□□□□ 0.01
MSI1O43347 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.12■□□□□ 0.01
MSI1O43347 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSI1O43347 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.11■□□□□ 0.01
MSI1O43347 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 BX640514.1-201ENST00000583223 1918 ntBASIC15.11■□□□□ 0.01
MSI1O43347 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MSI1O43347 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MSI1O43347 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 AC026748.1-201ENST00000624349 3251 ntBASIC15.11■□□□□ 0.01
MSI1O43347 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 AC015802.1-201ENST00000588104 1449 ntBASIC15.11■□□□□ 0.01
MSI1O43347 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms