Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.78□□□□□ -0.52
SRRM4A7MD48 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AC138951.2-201ENST00000623455 1161 ntBASIC11.78□□□□□ -0.52
SRRM4A7MD48 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
SRRM4A7MD48 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.77□□□□□ -0.52
SRRM4A7MD48 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.77□□□□□ -0.52
SRRM4A7MD48 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
SRRM4A7MD48 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.77□□□□□ -0.52
SRRM4A7MD48 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.77□□□□□ -0.52
SRRM4A7MD48 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SRRM4A7MD48 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 NME2P1-201ENST00000426182 414 ntBASIC11.77□□□□□ -0.53
SRRM4A7MD48 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 CICP12-201ENST00000455801 843 ntBASIC11.77□□□□□ -0.53
SRRM4A7MD48 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 KRT90P-201ENST00000549264 1064 ntBASIC11.77□□□□□ -0.53
SRRM4A7MD48 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 RN7SL713P-201ENST00000582127 302 ntBASIC11.77□□□□□ -0.53
SRRM4A7MD48 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 AL358472.5-202ENST00000641448 1267 ntBASIC11.77□□□□□ -0.53
SRRM4A7MD48 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 MBLAC2-202ENST00000514906 1936 ntBASIC11.77□□□□□ -0.53
SRRM4A7MD48 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 AC090643.2-201ENST00000623442 2029 ntBASIC11.77□□□□□ -0.53
SRRM4A7MD48 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SRRM4A7MD48 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
SRRM4A7MD48 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AL157996.1-201ENST00000624684 2299 ntBASIC11.76□□□□□ -0.53
SRRM4A7MD48 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms