Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 U73169.1-201ENST00000395152 367 ntBASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 RPL29P2-201ENST00000488409 460 ntBASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM88BA6NKF7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 TUBB2BP1-201ENST00000404155 871 ntBASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 TPT1P9-201ENST00000413759 514 ntBASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 OR4C14P-201ENST00000440929 923 ntBASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 PRR20FP-201ENST00000603320 180 ntBASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM88BA6NKF7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 AC015688.4-201ENST00000580780 1647 ntBASIC16.52■□□□□ 0.23
TMEM88BA6NKF7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 RN7SL684P-201ENST00000465665 294 ntBASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 AC132825.4-202ENST00000578792 434 ntBASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 IFNL3P1-201ENST00000595082 501 ntBASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 AL589935.2-201ENST00000616471 1231 ntBASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 AC079331.1-201ENST00000623200 1200 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms