Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AC016397.2-201ENST00000624848 1985 ntBASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
CCDC162PA2VCL2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 CICP16-201ENST00000502609 2813 ntBASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 MIR326-201ENST00000362220 95 ntBASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 HILS1-202ENST00000545329 423 ntBASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 AL356585.2-201ENST00000625078 2396 ntBASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 AC009093.10-201ENST00000641956 1442 ntBASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC162PA2VCL2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 HSPA8P5-201ENST00000456928 2069 ntBASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AC099336.1-201ENST00000417053 1171 ntBASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AL035414.1-201ENST00000451327 857 ntBASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC162PA2VCL2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms