Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 INTS4P1-203ENST00000641008 3683 ntBASIC21.15■□□□□ 0.98
HFM1A2PYH4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC21.14■□□□□ 0.98
HFM1A2PYH4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
HFM1A2PYH4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 GUSBP10-201ENST00000417412 665 ntBASIC21.14■□□□□ 0.98
HFM1A2PYH4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 RPL18AP3-201ENST00000462885 528 ntBASIC21.14■□□□□ 0.98
HFM1A2PYH4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HFM1A2PYH4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC21.14■□□□□ 0.98
HFM1A2PYH4 MT3-203ENST00000565838 421 ntTSL 3 BASIC21.14■□□□□ 0.98
HFM1A2PYH4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HFM1A2PYH4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HFM1A2PYH4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HFM1A2PYH4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HFM1A2PYH4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HFM1A2PYH4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 NPM1P43-201ENST00000558669 786 ntBASIC21.13■□□□□ 0.97
HFM1A2PYH4 AC005618.3-201ENST00000624928 458 ntBASIC21.13■□□□□ 0.97
HFM1A2PYH4 AP001184.1-201ENST00000637936 376 ntBASIC21.13■□□□□ 0.97
HFM1A2PYH4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
HFM1A2PYH4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HFM1A2PYH4 PYY2-201ENST00000315776 282 ntBASIC21.12■□□□□ 0.97
HFM1A2PYH4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 AC078991.1-201ENST00000437297 610 ntBASIC21.12■□□□□ 0.97
HFM1A2PYH4 AC104784.1-201ENST00000473096 294 ntBASIC21.12■□□□□ 0.97
HFM1A2PYH4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 AC005041.3-201ENST00000606287 649 ntBASIC21.12■□□□□ 0.97
HFM1A2PYH4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 AP000356.3-201ENST00000382243 753 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms