Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 CICP12-201ENST00000455801 843 ntBASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 RN7SL163P-201ENST00000583100 276 ntBASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AC132192.2-201ENST00000596206 1147 ntBASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AC138649.2-201ENST00000615886 705 ntBASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AC027601.3-201ENST00000622907 509 ntBASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIP2Q9UDT6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PUDPP3-201ENST00000445368 636 ntBASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 RPL18P13-201ENST00000478088 569 ntBASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 MTHFR-210ENST00000641407 2387 ntBASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CLIP2Q9UDT6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CLIP2Q9UDT6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms