Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 RN7SKP214-201ENST00000364208 315 ntBASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 MAGEA5-201ENST00000446757 942 ntBASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 AC008805.1-201ENST00000590892 364 ntBASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 AC008825.2-201ENST00000603374 718 ntBASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 AC128714.1-201ENST00000637035 887 ntBASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 AC003102.2-201ENST00000589195 1469 ntBASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 MBLAC2-202ENST00000514906 1936 ntBASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HDAC6Q9UBN7 OR2I1P-210ENST00000642037 4691 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AC126755.1-201ENST00000525846 6405 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AL008718.2-201ENST00000609206 1313 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 MIR33B-201ENST00000385104 96 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AL596276.2-201ENST00000447525 331 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 PRKXP1-201ENST00000561423 1122 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AC103988.2-201ENST00000561804 725 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 AL132994.2-201ENST00000603120 687 ntBASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HDAC6Q9UBN7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HDAC6Q9UBN7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
HDAC6Q9UBN7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.52■□□□□ 0.23
HDAC6Q9UBN7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HDAC6Q9UBN7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HDAC6Q9UBN7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
HDAC6Q9UBN7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms