Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 CYP4F23P-201ENST00000593402 1579 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 ISCA2P1-201ENST00000425548 448 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 AL596276.2-201ENST00000447525 331 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AL353637.1-201ENST00000451571 732 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC079328.1-201ENST00000560358 952 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 RN7SL574P-201ENST00000581512 297 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 RN7SL190P-201ENST00000582519 257 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC015967.2-201ENST00000624092 234 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC006435.4-201ENST00000625037 234 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 AL356737.1-201ENST00000634391 234 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 AJ011931.1-201ENST00000618749 2492 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 TMBIM7P-202ENST00000641474 1516 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 KRT8P28-201ENST00000433288 1390 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRFN1Q9P244 KRT8P21-201ENST00000430398 1491 ntBASIC13.42□□□□□ -0.26
LRFN1Q9P244 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.42□□□□□ -0.26
LRFN1Q9P244 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.41□□□□□ -0.26
LRFN1Q9P244 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AC007274.2-201ENST00000421675 662 ntBASIC13.41□□□□□ -0.26
LRFN1Q9P244 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 POU5F1P2-201ENST00000521750 823 ntBASIC13.41□□□□□ -0.26
LRFN1Q9P244 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AC103988.2-201ENST00000561804 725 ntBASIC13.41□□□□□ -0.26
LRFN1Q9P244 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRFN1Q9P244 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.41□□□□□ -0.26
LRFN1Q9P244 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms