Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 AL512638.1-201ENST00000457493 794 ntBASIC14.41□□□□□ -0.1
MKS1Q9NXB0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 AP001160.2-201ENST00000596071 487 ntBASIC14.41□□□□□ -0.1
MKS1Q9NXB0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 AC083964.2-201ENST00000623988 2396 ntBASIC14.41□□□□□ -0.1
MKS1Q9NXB0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 AL928654.5-201ENST00000624831 2501 ntBASIC14.41□□□□□ -0.1
MKS1Q9NXB0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 ABCD1P2-201ENST00000429313 1601 ntBASIC14.41□□□□□ -0.1
MKS1Q9NXB0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AL162726.2-201ENST00000438986 1017 ntBASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AC093433.1-201ENST00000458048 571 ntBASIC14.4□□□□□ -0.1
MKS1Q9NXB0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AC106820.3-201ENST00000561653 397 ntBASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AC009486.1-201ENST00000569860 813 ntBASIC14.4□□□□□ -0.1
MKS1Q9NXB0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AP002761.4-201ENST00000565433 3361 ntBASIC14.4□□□□□ -0.1
MKS1Q9NXB0 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.4□□□□□ -0.1
MKS1Q9NXB0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MKS1Q9NXB0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
MKS1Q9NXB0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
MKS1Q9NXB0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MKS1Q9NXB0 AL355102.3-201ENST00000554299 1678 ntBASIC14.39□□□□□ -0.11
MKS1Q9NXB0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MKS1Q9NXB0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MKS1Q9NXB0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MKS1Q9NXB0 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms