Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 MYCLP2-201ENST00000449268 967 ntBASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 ZNF890P-202ENST00000530367 1156 ntBASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 AC055876.2-201ENST00000531834 546 ntBASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 AC044860.1-202ENST00000559481 777 ntBASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 BEND3P3-201ENST00000611030 2440 ntBASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AL158070.2-201ENST00000623713 1621 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AL645937.2-201ENST00000396808 931 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 TMEM14DP-201ENST00000422205 345 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AC119751.2-201ENST00000504529 210 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 SPDYE18-201ENST00000510091 1050 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AL512361.1-201ENST00000554200 418 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 MIR4538-201ENST00000581377 78 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 MIR6775-201ENST00000617557 69 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 Z82170.1-201ENST00000625081 3192 ntBASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.97□□□□□ -0.17
CCM2LQ9NUG4 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms