Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 AC007274.1-201ENST00000439805 662 ntBASIC15.53■□□□□ 0.08
CISHQ9NSE2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 AP000346.4-201ENST00000614827 381 ntBASIC15.53■□□□□ 0.08
CISHQ9NSE2 AC133540.1-201ENST00000620845 1019 ntBASIC15.53■□□□□ 0.08
CISHQ9NSE2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 FAM90A7P-201ENST00000382628 1395 ntBASIC15.52■□□□□ 0.08
CISHQ9NSE2 FAM90A23P-201ENST00000400136 1395 ntBASIC15.52■□□□□ 0.08
CISHQ9NSE2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 HLA-J-204ENST00000495278 958 ntBASIC15.52■□□□□ 0.08
CISHQ9NSE2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 AC126915.1-201ENST00000522847 1038 ntBASIC15.52■□□□□ 0.08
CISHQ9NSE2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CISHQ9NSE2 AC004923.1-202ENST00000642106 209 ntBASIC15.52■□□□□ 0.08
CISHQ9NSE2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CISHQ9NSE2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CISHQ9NSE2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CISHQ9NSE2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CISHQ9NSE2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
CISHQ9NSE2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CISHQ9NSE2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CISHQ9NSE2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.51■□□□□ 0.07
CISHQ9NSE2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CISHQ9NSE2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CISHQ9NSE2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.51■□□□□ 0.07
CISHQ9NSE2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CISHQ9NSE2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CISHQ9NSE2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms