Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 AC018638.5-201ENST00000450885 754 ntBASIC16.18■□□□□ 0.18
VTA1Q9NP79 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 AC104506.1-201ENST00000609247 429 ntBASIC16.18■□□□□ 0.18
VTA1Q9NP79 MIR6074-201ENST00000612054 107 ntBASIC16.18■□□□□ 0.18
VTA1Q9NP79 AL132780.4-201ENST00000624870 1135 ntBASIC16.18■□□□□ 0.18
VTA1Q9NP79 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 AC064801.2-201ENST00000625052 1303 ntBASIC16.18■□□□□ 0.18
VTA1Q9NP79 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VTA1Q9NP79 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VTA1Q9NP79 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AC098934.1-203ENST00000442868 1262 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 PIN4P1-201ENST00000451079 396 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 RNA5SP417-201ENST00000516459 108 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 CR383656.3-201ENST00000551315 183 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AC005041.3-201ENST00000606287 649 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AC006372.4-201ENST00000624122 1543 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 AC215219.1-201ENST00000400706 1817 ntBASIC16.17■□□□□ 0.18
VTA1Q9NP79 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VTA1Q9NP79 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.17■□□□□ 0.18
VTA1Q9NP79 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTA1Q9NP79 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VTA1Q9NP79 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms