Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 AL354877.1-201ENST00000424412 413 ntBASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 CSF2RBP1-201ENST00000447905 391 ntBASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 LAP3P2-201ENST00000454686 1454 ntBASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 AC079781.5-202ENST00000641784 3743 ntBASIC14.22□□□□□ -0.13
PDLIM5Q96HC4 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 AC063926.2-201ENST00000623766 1308 ntBASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 EEF1DP1-201ENST00000585891 896 ntBASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 AC021016.3-201ENST00000608367 477 ntBASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 MIR6775-201ENST00000617557 69 ntBASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDLIM5Q96HC4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDLIM5Q96HC4 AC015818.8-201ENST00000587907 1519 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms