Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AC104073.2-201ENST00000453737 312 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 MARK2P5-201ENST00000507649 634 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 RNA5SP423-201ENST00000517127 109 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 RN7SL774P-201ENST00000577467 290 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 BX088702.1-201ENST00000610784 235 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AP000346.4-201ENST00000614827 381 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AP001505.2-201ENST00000616815 443 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AL136295.7-201ENST00000619226 1200 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AC091544.8-201ENST00000619490 361 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AL161772.1-201ENST00000610494 4412 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AL359881.3-201ENST00000602640 1721 ntBASIC13.56□□□□□ -0.24
SCMH1Q96GD3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCMH1Q96GD3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 SBF1P1-201ENST00000444527 5631 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 TCAF1P1-201ENST00000414990 2232 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC012441.2-201ENST00000444843 739 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 UPF3AP2-201ENST00000457924 1132 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC090164.2-201ENST00000611487 516 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC091812.3-201ENST00000621362 345 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 CICP8-201ENST00000455800 2813 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SCMH1Q96GD3 SALL4P5-201ENST00000419001 1760 ntBASIC13.55□□□□□ -0.24
SCMH1Q96GD3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms