Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 MED15P7-201ENST00000435410 822 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC010202.1-201ENST00000551181 405 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 RN7SL784P-201ENST00000577319 342 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 EIF3K-214ENST00000614624 780 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 AC092471.2-201ENST00000637219 651 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 TNNT3-216ENST00000641119 941 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 REXO1L4P-201ENST00000605109 1937 ntBASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE2Q8WXH0 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC067852.2-201ENST00000590513 2313 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 EXOSC1-204ENST00000370902 923 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC091893.1-201ENST00000503772 399 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL356585.2-201ENST00000625078 2396 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RPL3P2-204ENST00000413027 1203 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC073210.1-201ENST00000414799 232 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL162386.1-201ENST00000433817 645 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 HNRNPA1P3-201ENST00000440968 551 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC008434.1-201ENST00000514201 549 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 COPZ1-214ENST00000552218 797 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RN7SL220P-201ENST00000581978 300 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC124067.4-201ENST00000519691 2379 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RPLP1P13-201ENST00000434567 299 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC023157.1-201ENST00000453713 402 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC023824.6-201ENST00000565523 703 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ZBED1P1-201ENST00000502364 1930 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MIA-201ENST00000263369 632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms