Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC025262.2-201ENST00000623975 1056 ntBASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AC007686.3-201ENST00000619017 3487 ntBASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 HIST2H2BA-201ENST00000412169 381 ntBASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AC024293.1-201ENST00000467930 498 ntBASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AC012158.2-201ENST00000536546 354 ntBASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 DGAT2L7P-201ENST00000602462 744 ntBASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 MIR6720-201ENST00000611664 98 ntBASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.69■□□□□ 0.26
U2AF1L4Q8WU68 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 LINC01101-201ENST00000622953 1884 ntBASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 RPL5P21-201ENST00000404620 815 ntBASIC16.68■□□□□ 0.26
U2AF1L4Q8WU68 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms