Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AC005695.3-201ENST00000614522 232 ntBASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AC004899.1-201ENST00000424687 1714 ntBASIC15.53■□□□□ 0.08
LMO3Q8TAP4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.53■□□□□ 0.08
LMO3Q8TAP4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 TUBB1P2-201ENST00000422712 1306 ntBASIC15.52■□□□□ 0.08
LMO3Q8TAP4 TUBB1P1-201ENST00000503144 1300 ntBASIC15.52■□□□□ 0.08
LMO3Q8TAP4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AL023803.2-201ENST00000620080 638 ntBASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 AC068587.8-201ENST00000641239 219 ntBASIC15.52■□□□□ 0.08
LMO3Q8TAP4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LMO3Q8TAP4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.52■□□□□ 0.07
LMO3Q8TAP4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 AC018629.1-201ENST00000623381 1736 ntBASIC15.51■□□□□ 0.07
LMO3Q8TAP4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 FER1L4-210ENST00000615531 5998 ntBASIC15.51■□□□□ 0.07
LMO3Q8TAP4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.51■□□□□ 0.07
LMO3Q8TAP4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LMO3Q8TAP4 AC092580.1-201ENST00000433998 658 ntBASIC15.51■□□□□ 0.07
LMO3Q8TAP4 KRT18P15-201ENST00000458108 1291 ntBASIC15.51■□□□□ 0.07
LMO3Q8TAP4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms