Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 BANF1P3-201ENST00000412556 261 ntBASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 MPRIPP1-201ENST00000452433 1089 ntBASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 AC027237.1-201ENST00000560942 655 ntBASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 MIR3147-201ENST00000577811 66 ntBASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 MIR5572-201ENST00000583188 137 ntBASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 AC018635.2-201ENST00000608625 364 ntBASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC38A9Q8NBW4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC38A9Q8NBW4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AP002353.1-201ENST00000528257 1599 ntBASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AL365209.1-201ENST00000624418 6473 ntBASIC13.7□□□□□ -0.22
SLC38A9Q8NBW4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC38A9Q8NBW4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms