Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AL031595.1-201ENST00000623969 4709 ntBASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC027601.5-201ENST00000624065 2482 ntBASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 RPL7P3-201ENST00000441388 714 ntBASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 GAPDHP21-201ENST00000450301 1010 ntBASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AC073413.1-201ENST00000603927 732 ntBASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 MIR1202-201ENST00000408529 83 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AL355994.2-201ENST00000447882 704 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 SORD2P-201ENST00000558556 1069 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 C2orf69P2-201ENST00000562032 1123 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms