Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 INE2-201ENST00000630399 1874 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 RN7SL832P-201ENST00000607781 1756 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 MRPL37P1-201ENST00000592451 1337 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 MYCLP2-201ENST00000449268 967 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 FO681548.1-201ENST00000455617 1132 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AL132655.2-201ENST00000596276 594 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 AC004233.3-201ENST00000607794 1269 ntBASIC14.78□□□□□ -0.04
RAPH1Q70E73 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 MEX3B-202ENST00000558133 4333 ntBASIC14.77□□□□□ -0.04
RAPH1Q70E73 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 AL391825.1-201ENST00000457671 1364 ntBASIC14.77□□□□□ -0.04
RAPH1Q70E73 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 KRT8P35-201ENST00000483942 1338 ntBASIC14.77□□□□□ -0.04
RAPH1Q70E73 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.77□□□□□ -0.04
RAPH1Q70E73 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAPH1Q70E73 ACTBP8-201ENST00000403258 1108 ntBASIC14.77□□□□□ -0.05
RAPH1Q70E73 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 AC087499.6-201ENST00000411576 835 ntBASIC14.77□□□□□ -0.05
RAPH1Q70E73 AC098850.1-201ENST00000419919 790 ntBASIC14.77□□□□□ -0.05
RAPH1Q70E73 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAPH1Q70E73 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 AC005252.2-201ENST00000624630 1141 ntBASIC14.77□□□□□ -0.05
RAPH1Q70E73 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAPH1Q70E73 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAPH1Q70E73 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAPH1Q70E73 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 AL122018.1-201ENST00000446607 2310 ntBASIC14.77□□□□□ -0.05
RAPH1Q70E73 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
RAPH1Q70E73 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAPH1Q70E73 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms