Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 LRRC59-203ENST00000576448 1531 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 NCLP1-201ENST00000445357 1963 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 C8orf49-201ENST00000525043 1968 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 KLF2P2-201ENST00000416807 1039 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC009477.1-201ENST00000452936 217 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC097493.3-201ENST00000509725 367 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SPDYE18-201ENST00000510091 1050 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AP001582.1-201ENST00000525856 295 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SNHG9-202ENST00000564014 471 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC004899.2-201ENST00000622993 3860 ntBASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00242Q5T6M2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 TSEN15P1-201ENST00000423257 515 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AP006288.1-201ENST00000446065 395 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC135586.1-201ENST00000539323 574 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC025678.2-201ENST00000562061 970 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC120045.2-201ENST00000567334 178 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC009407.1-201ENST00000568958 598 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms