Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 RN7SL258P-201ENST00000478664 300 ntBASIC15.5■□□□□ 0.07
VARS2Q5ST30 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 AC006480.2-201ENST00000609770 1337 ntBASIC15.49■□□□□ 0.07
VARS2Q5ST30 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 OR2K2-202ENST00000374428 1038 ntBASIC15.49■□□□□ 0.07
VARS2Q5ST30 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 AC026803.1-201ENST00000569130 274 ntBASIC15.49■□□□□ 0.07
VARS2Q5ST30 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 MIR6769A-201ENST00000617340 73 ntBASIC15.49■□□□□ 0.07
VARS2Q5ST30 AC106795.5-201ENST00000623288 454 ntBASIC15.49■□□□□ 0.07
VARS2Q5ST30 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VARS2Q5ST30 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.49■□□□□ 0.07
VARS2Q5ST30 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VARS2Q5ST30 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.48■□□□□ 0.07
VARS2Q5ST30 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms