Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 REXO1L4P-201ENST00000605109 1937 ntBASIC14.37□□□□□ -0.11
SFT2D3Q587I9 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 AC090505.1-201ENST00000430515 1834 ntBASIC14.37□□□□□ -0.11
SFT2D3Q587I9 AL354702.1-201ENST00000442006 1960 ntBASIC14.37□□□□□ -0.11
SFT2D3Q587I9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 KRT18P25-201ENST00000508931 1278 ntBASIC14.37□□□□□ -0.11
SFT2D3Q587I9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 AL008721.1-201ENST00000609964 604 ntBASIC14.37□□□□□ -0.11
SFT2D3Q587I9 AP005019.2-201ENST00000615104 511 ntBASIC14.37□□□□□ -0.11
SFT2D3Q587I9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFT2D3Q587I9 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 AC012617.1-204ENST00000586340 2305 ntBASIC14.36□□□□□ -0.11
SFT2D3Q587I9 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 BOLA2P3-201ENST00000404566 256 ntBASIC14.36□□□□□ -0.11
SFT2D3Q587I9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 AC106760.1-201ENST00000508690 800 ntBASIC14.36□□□□□ -0.11
SFT2D3Q587I9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 AL359881.2-201ENST00000602973 570 ntBASIC14.36□□□□□ -0.11
SFT2D3Q587I9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 AL645728.2-202ENST00000641679 227 ntBASIC14.36□□□□□ -0.11
SFT2D3Q587I9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFT2D3Q587I9 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms