Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 SIGLEC16-201ENST00000599858 1437 ntBASIC7.43□□□□□ -1.22
LINC01554Q52M75 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01554Q52M75 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 AC073548.1-201ENST00000624088 1882 ntBASIC7.43□□□□□ -1.22
LINC01554Q52M75 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
LINC01554Q52M75 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01554Q52M75 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FAM177A1-203ENST00000396472 3254 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 CARMN-205ENST00000518014 5131 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 IGHV3-47-201ENST00000425060 335 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 AP002383.4-201ENST00000442518 975 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FAM86EP-206ENST00000510506 987 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 FOSL1P1-201ENST00000511041 816 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 DUX4L17-201ENST00000557360 1267 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 AC087641.1-201ENST00000557561 1021 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 AC139887.3-201ENST00000568585 713 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 NKAPP1-205ENST00000585790 367 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 MTDHP3-201ENST00000594186 672 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ANKRD20A7P-201ENST00000402318 2414 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 AC011477.6-201ENST00000604980 1927 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 AP005117.1-201ENST00000584346 1413 ntBASIC7.42□□□□□ -1.22
LINC01554Q52M75 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01554Q52M75 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01554Q52M75 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms