Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 AC130709.1-201ENST00000484779 1212 ntBASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 AL031713.1-201ENST00000564813 661 ntBASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 AC009084.3-201ENST00000623356 437 ntBASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC012362.1-201ENST00000434906 739 ntBASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AL591471.1-201ENST00000621855 229 ntBASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 LAP3P2-201ENST00000454686 1454 ntBASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHROOM1Q2M3G4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 PIN4P1-201ENST00000451079 396 ntBASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 RN7SL81P-201ENST00000493781 261 ntBASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 AC022447.6-201ENST00000515522 438 ntBASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 IGHV3-37-201ENST00000518544 340 ntBASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 CR383656.3-201ENST00000551315 183 ntBASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.84■□□□□ 0.29
SHROOM1Q2M3G4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms