Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 BX284668.4-201ENST00000453917 508 ntBASIC18.86■□□□□ 0.61
CCDC27Q2M243 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 AP001258.2-201ENST00000529891 490 ntBASIC18.86■□□□□ 0.61
CCDC27Q2M243 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 MIR3188-201ENST00000583494 85 ntBASIC18.86■□□□□ 0.61
CCDC27Q2M243 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 AC015656.1-201ENST00000624209 3578 ntBASIC18.86■□□□□ 0.61
CCDC27Q2M243 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 MIR1247-201ENST00000408206 136 ntBASIC18.85■□□□□ 0.61
CCDC27Q2M243 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 AL512310.5-201ENST00000551999 515 ntBASIC18.85■□□□□ 0.61
CCDC27Q2M243 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 BAP1-211ENST00000615113 489 ntBASIC18.85■□□□□ 0.61
CCDC27Q2M243 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC27Q2M243 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC27Q2M243 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 TUBBP5-203ENST00000508529 1334 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 RN7SKP214-201ENST00000364208 315 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 KRT8P13-201ENST00000463294 1010 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 TMEM198B-204ENST00000484016 896 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 RCC2P8-201ENST00000502779 1035 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 MIR3615-201ENST00000581999 87 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 AC026740.1-201ENST00000607068 791 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 AC138649.2-201ENST00000615886 705 ntBASIC18.84■□□□□ 0.61
CCDC27Q2M243 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms