Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.42□□□□□ -0.42
COL10A1Q03692 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 AC099521.3-201ENST00000624251 2938 ntBASIC12.41□□□□□ -0.42
COL10A1Q03692 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 MBLAC2-202ENST00000514906 1936 ntBASIC12.41□□□□□ -0.42
COL10A1Q03692 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 AC009093.2-202ENST00000620513 2079 ntBASIC12.41□□□□□ -0.42
COL10A1Q03692 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.41□□□□□ -0.42
COL10A1Q03692 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.41□□□□□ -0.42
COL10A1Q03692 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 AC006453.4-201ENST00000636949 1252 ntBASIC12.41□□□□□ -0.42
COL10A1Q03692 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.41□□□□□ -0.42
COL10A1Q03692 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL10A1Q03692 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
COL10A1Q03692 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
COL10A1Q03692 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.4□□□□□ -0.42
COL10A1Q03692 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.4□□□□□ -0.42
COL10A1Q03692 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 MYADML-201ENST00000474610 2147 ntBASIC12.4□□□□□ -0.42
COL10A1Q03692 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.4□□□□□ -0.42
COL10A1Q03692 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 AC027612.1-201ENST00000445234 2395 ntBASIC12.4□□□□□ -0.42
COL10A1Q03692 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
COL10A1Q03692 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.4□□□□□ -0.42
COL10A1Q03692 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
COL10A1Q03692 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.4□□□□□ -0.42
COL10A1Q03692 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.4□□□□□ -0.42
COL10A1Q03692 CNN2P8-201ENST00000421872 913 ntBASIC12.4□□□□□ -0.42
COL10A1Q03692 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.4□□□□□ -0.42
COL10A1Q03692 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.4□□□□□ -0.42
COL10A1Q03692 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.4□□□□□ -0.42
COL10A1Q03692 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.4□□□□□ -0.42
COL10A1Q03692 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
COL10A1Q03692 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
COL10A1Q03692 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.4□□□□□ -0.42
COL10A1Q03692 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.4□□□□□ -0.42
COL10A1Q03692 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.4□□□□□ -0.42
COL10A1Q03692 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL10A1Q03692 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms