Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CDK5Q00535 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 USP17L6P-201ENST00000382470 1197 ntBASIC13.19□□□□□ -0.3
CDK5Q00535 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.19□□□□□ -0.3
CDK5Q00535 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.19□□□□□ -0.3
CDK5Q00535 KRT18P8-201ENST00000581937 1246 ntBASIC13.19□□□□□ -0.3
CDK5Q00535 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.19□□□□□ -0.3
CDK5Q00535 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 AP000593.2-201ENST00000542775 1433 ntBASIC13.19□□□□□ -0.3
CDK5Q00535 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CDK5Q00535 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.19□□□□□ -0.3
CDK5Q00535 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.19□□□□□ -0.3
CDK5Q00535 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.19□□□□□ -0.3
CDK5Q00535 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 AC126335.2-201ENST00000623362 4637 ntBASIC13.19□□□□□ -0.3
CDK5Q00535 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDK5Q00535 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CDK5Q00535 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.18□□□□□ -0.3
CDK5Q00535 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 MIR1233-2-201ENST00000408138 82 ntBASIC13.18□□□□□ -0.3
CDK5Q00535 MIR1233-1-201ENST00000408722 82 ntBASIC13.18□□□□□ -0.3
CDK5Q00535 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 AC093433.1-201ENST00000458048 571 ntBASIC13.18□□□□□ -0.3
CDK5Q00535 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.18□□□□□ -0.3
CDK5Q00535 AL391280.1-201ENST00000506969 1062 ntBASIC13.18□□□□□ -0.3
CDK5Q00535 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.18□□□□□ -0.3
CDK5Q00535 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
CDK5Q00535 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms