Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 AC006486.2-201ENST00000624246 2199 ntBASIC12.99□□□□□ -0.33
NKX6-1P78426 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-1P78426 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.99□□□□□ -0.33
NKX6-1P78426 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 MESTP3-201ENST00000503460 968 ntBASIC12.99□□□□□ -0.33
NKX6-1P78426 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.99□□□□□ -0.33
NKX6-1P78426 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-1P78426 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.99□□□□□ -0.33
NKX6-1P78426 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-1P78426 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.99□□□□□ -0.33
NKX6-1P78426 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-1P78426 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.99□□□□□ -0.33
NKX6-1P78426 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.99□□□□□ -0.33
NKX6-1P78426 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 AL023775.1-201ENST00000454907 1746 ntBASIC12.99□□□□□ -0.33
NKX6-1P78426 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-1P78426 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 CLUHP2-201ENST00000426660 1303 ntBASIC12.98□□□□□ -0.33
NKX6-1P78426 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NKX6-1P78426 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 AL008707.1-201ENST00000422498 534 ntBASIC12.98□□□□□ -0.33
NKX6-1P78426 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.98□□□□□ -0.33
NKX6-1P78426 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-1P78426 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX6-1P78426 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-1P78426 AC138466.3-201ENST00000619983 221 ntBASIC12.98□□□□□ -0.33
NKX6-1P78426 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-1P78426 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-1P78426 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX6-1P78426 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX6-1P78426 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-1P78426 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-1P78426 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-1P78426 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-1P78426 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NKX6-1P78426 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-1P78426 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-1P78426 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-1P78426 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-1P78426 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms