Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC011474.4-201ENST00000623523 2076 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 MIR326-201ENST00000362220 95 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 KLF2P4-201ENST00000451959 1225 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 KRT17P8-201ENST00000540749 863 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AC023310.1-201ENST00000554836 735 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 DUX4L46-201ENST00000566845 751 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AC132192.2-201ENST00000596206 1147 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 AL512343.1-201ENST00000605837 169 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CICP16-201ENST00000502609 2813 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 AC041040.2-201ENST00000622926 2899 ntBASIC12.78□□□□□ -0.36
HIST1H3AP68431 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
HIST1H3AP68431 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.77□□□□□ -0.36
HIST1H3AP68431 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H3AP68431 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.77□□□□□ -0.36
HIST1H3AP68431 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H3AP68431 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H3AP68431 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H3AP68431 MST1P2-201ENST00000457982 2291 ntBASIC12.77□□□□□ -0.36
HIST1H3AP68431 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H3AP68431 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H3AP68431 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H3AP68431 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.77□□□□□ -0.36
HIST1H3AP68431 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 CTBP2P5-201ENST00000454986 1264 ntBASIC12.77□□□□□ -0.37
HIST1H3AP68431 TMEM198B-204ENST00000484016 896 ntBASIC12.77□□□□□ -0.37
HIST1H3AP68431 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.77□□□□□ -0.37
HIST1H3AP68431 AP006547.1-201ENST00000563435 692 ntBASIC12.77□□□□□ -0.37
HIST1H3AP68431 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 TUBB8P4-201ENST00000511806 1324 ntBASIC12.77□□□□□ -0.37
HIST1H3AP68431 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H3AP68431 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H3AP68431 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms