Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CLDN6P56747 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN6P56747 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN6P56747 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 AC084752.1-201ENST00000509766 622 ntBASIC13.99□□□□□ -0.17
CLDN6P56747 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDN6P56747 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN6P56747 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN6P56747 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDN6P56747 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.99□□□□□ -0.17
CLDN6P56747 NUDT4P2-201ENST00000578341 546 ntBASIC13.99□□□□□ -0.17
CLDN6P56747 AC009560.1-201ENST00000620208 434 ntBASIC13.99□□□□□ -0.17
CLDN6P56747 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN6P56747 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLDN6P56747 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLDN6P56747 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN6P56747 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN6P56747 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN6P56747 TMBIM7P-203ENST00000641617 1718 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 C18orf15-201ENST00000623680 2534 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 AC087481.3-201ENST00000602886 1894 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLDN6P56747 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 KRT17P5-201ENST00000332088 839 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 TLE1P1-201ENST00000422965 589 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 AL035414.1-201ENST00000451327 857 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 RN7SL81P-201ENST00000493781 261 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN6P56747 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLDN6P56747 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN6P56747 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN6P56747 RN7SL470P-201ENST00000583069 259 ntBASIC13.98□□□□□ -0.17
CLDN6P56747 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CLDN6P56747 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN6P56747 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLDN6P56747 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CLDN6P56747 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN6P56747 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CLDN6P56747 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN6P56747 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLDN6P56747 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN6P56747 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN6P56747 AL354861.1-201ENST00000445213 355 ntBASIC13.97□□□□□ -0.17
CLDN6P56747 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN6P56747 RN7SL277P-201ENST00000481521 288 ntBASIC13.97□□□□□ -0.17
CLDN6P56747 AC093909.3-201ENST00000504783 336 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms