Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 AL158070.2-201ENST00000623713 1621 ntBASIC11.62□□□□□ -0.55
CDC34P49427 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CDC34P49427 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 KRT18P32-201ENST00000424695 1287 ntBASIC11.62□□□□□ -0.55
CDC34P49427 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.62□□□□□ -0.55
CDC34P49427 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.62□□□□□ -0.55
CDC34P49427 AC005237.2-201ENST00000434368 219 ntBASIC11.62□□□□□ -0.55
CDC34P49427 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 KRT18P56-201ENST00000507275 550 ntBASIC11.62□□□□□ -0.55
CDC34P49427 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
CDC34P49427 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.62□□□□□ -0.55
CDC34P49427 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.62□□□□□ -0.55
CDC34P49427 AL589739.1-201ENST00000607720 493 ntBASIC11.62□□□□□ -0.55
CDC34P49427 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CDC34P49427 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.62□□□□□ -0.55
CDC34P49427 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 OR2I1P-208ENST00000641137 4948 ntBASIC11.62□□□□□ -0.55
CDC34P49427 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CDC34P49427 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 AC093525.8-201ENST00000624099 1342 ntBASIC11.61□□□□□ -0.55
CDC34P49427 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 CETN4P-206ENST00000642099 2168 ntBASIC11.61□□□□□ -0.55
CDC34P49427 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 YBX2P1-201ENST00000394192 760 ntBASIC11.61□□□□□ -0.55
CDC34P49427 AL645937.2-201ENST00000396808 931 ntBASIC11.61□□□□□ -0.55
CDC34P49427 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 AL591424.1-201ENST00000442569 1213 ntBASIC11.61□□□□□ -0.55
CDC34P49427 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 RPL13AP23-201ENST00000480739 586 ntBASIC11.61□□□□□ -0.55
CDC34P49427 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.61□□□□□ -0.55
CDC34P49427 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.61□□□□□ -0.55
CDC34P49427 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.61□□□□□ -0.55
CDC34P49427 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.61□□□□□ -0.55
CDC34P49427 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
CDC34P49427 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms