Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 AC073548.1-201ENST00000624088 1882 ntBASIC15.23■□□□□ 0.03
MMP13P45452 AC020658.7-201ENST00000624274 2442 ntBASIC15.23■□□□□ 0.03
MMP13P45452 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP13P45452 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 RN7SKP230-201ENST00000365642 335 ntBASIC15.23■□□□□ 0.03
MMP13P45452 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 AC079776.1-201ENST00000401540 1152 ntBASIC15.23■□□□□ 0.03
MMP13P45452 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 CD8B2-202ENST00000417670 633 ntBASIC15.23■□□□□ 0.03
MMP13P45452 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MMP13P45452 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP13P45452 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.23■□□□□ 0.03
MMP13P45452 AP000812.2-201ENST00000538934 718 ntBASIC15.23■□□□□ 0.03
MMP13P45452 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP13P45452 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP13P45452 AC006453.4-201ENST00000636949 1252 ntBASIC15.23■□□□□ 0.03
MMP13P45452 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
MMP13P45452 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP13P45452 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP13P45452 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP13P45452 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP13P45452 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MMP13P45452 SBF1P1-201ENST00000444527 5631 ntBASIC15.23■□□□□ 0.03
MMP13P45452 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MMP13P45452 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 AL354989.2-201ENST00000435838 1540 ntBASIC15.22■□□□□ 0.03
MMP13P45452 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MMP13P45452 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MMP13P45452 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MMP13P45452 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
MMP13P45452 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP13P45452 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 FAM8A4P-201ENST00000435433 1213 ntBASIC15.22■□□□□ 0.03
MMP13P45452 RPL7P3-201ENST00000441388 714 ntBASIC15.22■□□□□ 0.03
MMP13P45452 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 KLF2P4-201ENST00000451959 1225 ntBASIC15.22■□□□□ 0.03
MMP13P45452 GPR53P-205ENST00000457298 1084 ntBASIC15.22■□□□□ 0.03
MMP13P45452 AL391280.1-201ENST00000506969 1062 ntBASIC15.22■□□□□ 0.03
MMP13P45452 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.22■□□□□ 0.03
MMP13P45452 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP13P45452 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.22■□□□□ 0.03
MMP13P45452 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.22■□□□□ 0.03
MMP13P45452 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP13P45452 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MMP13P45452 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.22■□□□□ 0.03
MMP13P45452 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 RHOXF1P1-202ENST00000635473 501 ntBASIC15.22■□□□□ 0.03
MMP13P45452 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MMP13P45452 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MMP13P45452 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP13P45452 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MMP13P45452 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP13P45452 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP13P45452 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP13P45452 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.21■□□□□ 0.03
MMP13P45452 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MMP13P45452 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms