Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PDE6BP35913 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDE6BP35913 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 AC067931.2-201ENST00000623655 2003 ntBASIC17.76■□□□□ 0.43
PDE6BP35913 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6BP35913 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDE6BP35913 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6BP35913 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.76■□□□□ 0.43
PDE6BP35913 VENTXP4-201ENST00000449029 958 ntBASIC17.76■□□□□ 0.43
PDE6BP35913 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6BP35913 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.76■□□□□ 0.43
PDE6BP35913 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.76■□□□□ 0.43
PDE6BP35913 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDE6BP35913 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.76■□□□□ 0.43
PDE6BP35913 TRMT112P3-201ENST00000580149 358 ntBASIC17.76■□□□□ 0.43
PDE6BP35913 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 AL139339.2-201ENST00000608063 657 ntBASIC17.76■□□□□ 0.43
PDE6BP35913 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDE6BP35913 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6BP35913 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.76■□□□□ 0.43
PDE6BP35913 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE6BP35913 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
PDE6BP35913 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDE6BP35913 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 ACTBP7-201ENST00000418351 1124 ntBASIC17.75■□□□□ 0.43
PDE6BP35913 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.75■□□□□ 0.43
PDE6BP35913 AC013553.1-201ENST00000560906 267 ntBASIC17.75■□□□□ 0.43
PDE6BP35913 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 DGAT2L7P-201ENST00000602462 744 ntBASIC17.75■□□□□ 0.43
PDE6BP35913 AC008972.2-201ENST00000606587 494 ntBASIC17.75■□□□□ 0.43
PDE6BP35913 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE6BP35913 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6BP35913 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6BP35913 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6BP35913 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDE6BP35913 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 BX679664.3-201ENST00000414070 555 ntBASIC17.74■□□□□ 0.43
PDE6BP35913 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDE6BP35913 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6BP35913 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6BP35913 AC006529.1-201ENST00000459978 637 ntBASIC17.74■□□□□ 0.43
PDE6BP35913 RN7SL788P-201ENST00000460504 316 ntBASIC17.74■□□□□ 0.43
PDE6BP35913 AC113935.1-201ENST00000471722 555 ntBASIC17.74■□□□□ 0.43
PDE6BP35913 AC083801.1-201ENST00000491689 358 ntBASIC17.74■□□□□ 0.43
PDE6BP35913 RN7SL375P-201ENST00000492442 298 ntBASIC17.74■□□□□ 0.43
PDE6BP35913 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6BP35913 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms