Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 AC091812.3-201ENST00000621362 345 ntBASIC13.06□□□□□ -0.32
HOXC12P31275 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.06□□□□□ -0.32
HOXC12P31275 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.06□□□□□ -0.32
HOXC12P31275 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
HOXC12P31275 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.06□□□□□ -0.32
HOXC12P31275 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.06□□□□□ -0.32
HOXC12P31275 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HOXC12P31275 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HOXC12P31275 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HOXC12P31275 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HOXC12P31275 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.05□□□□□ -0.32
HOXC12P31275 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.05□□□□□ -0.32
HOXC12P31275 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.05□□□□□ -0.32
HOXC12P31275 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.05□□□□□ -0.32
HOXC12P31275 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.05□□□□□ -0.32
HOXC12P31275 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 AC097724.1-201ENST00000609581 426 ntBASIC13.05□□□□□ -0.32
HOXC12P31275 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.05□□□□□ -0.32
HOXC12P31275 CU633904.3-201ENST00000624042 1029 ntBASIC13.05□□□□□ -0.32
HOXC12P31275 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.05□□□□□ -0.32
HOXC12P31275 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 CR383656.2-201ENST00000548656 2254 ntBASIC13.05□□□□□ -0.32
HOXC12P31275 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HOXC12P31275 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.05□□□□□ -0.32
HOXC12P31275 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.05□□□□□ -0.32
HOXC12P31275 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 AC003102.2-201ENST00000589195 1469 ntBASIC13.04□□□□□ -0.32
HOXC12P31275 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.04□□□□□ -0.32
HOXC12P31275 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.04□□□□□ -0.32
HOXC12P31275 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
HOXC12P31275 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
HOXC12P31275 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HOXC12P31275 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms