Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 TMBIM7P-202ENST00000641474 1516 ntBASIC14.9□□□□□ -0.02
PTPN3P26045 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 AC067750.1-201ENST00000608826 6545 ntBASIC14.9□□□□□ -0.02
PTPN3P26045 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PTPN3P26045 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTPN3P26045 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN3P26045 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN3P26045 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PTPN3P26045 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 AC005840.4-201ENST00000541242 2494 ntBASIC14.89□□□□□ -0.03
PTPN3P26045 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PTPN3P26045 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PTPN3P26045 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 AL365209.1-201ENST00000624418 6473 ntBASIC14.89□□□□□ -0.03
PTPN3P26045 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN3P26045 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.89□□□□□ -0.03
PTPN3P26045 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PTPN3P26045 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.89□□□□□ -0.03
PTPN3P26045 AL645933.1-201ENST00000440087 609 ntBASIC14.89□□□□□ -0.03
PTPN3P26045 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PTPN3P26045 CSF2RBP1-201ENST00000447905 391 ntBASIC14.89□□□□□ -0.03
PTPN3P26045 AC022210.1-201ENST00000449856 793 ntBASIC14.89□□□□□ -0.03
PTPN3P26045 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.89□□□□□ -0.03
PTPN3P26045 AC119751.2-201ENST00000504529 210 ntBASIC14.89□□□□□ -0.03
PTPN3P26045 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN3P26045 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.89□□□□□ -0.03
PTPN3P26045 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.89□□□□□ -0.03
PTPN3P26045 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PTPN3P26045 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.89□□□□□ -0.03
PTPN3P26045 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.89□□□□□ -0.03
PTPN3P26045 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.89□□□□□ -0.03
PTPN3P26045 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN3P26045 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTPN3P26045 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PTPN3P26045 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.88□□□□□ -0.03
PTPN3P26045 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PTPN3P26045 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PTPN3P26045 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.88□□□□□ -0.03
PTPN3P26045 GPR53P-205ENST00000457298 1084 ntBASIC14.88□□□□□ -0.03
PTPN3P26045 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTPN3P26045 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 AC104506.1-201ENST00000609247 429 ntBASIC14.88□□□□□ -0.03
PTPN3P26045 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.88□□□□□ -0.03
PTPN3P26045 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PTPN3P26045 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.88□□□□□ -0.03
PTPN3P26045 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.88□□□□□ -0.03
PTPN3P26045 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN3P26045 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTPN3P26045 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PTPN3P26045 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PTPN3P26045 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
PTPN3P26045 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN3P26045 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms