Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
RAB4AP20338 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB4AP20338 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.28□□□□□ -0.6
RAB4AP20338 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 AL358472.4-201ENST00000633140 710 ntBASIC11.28□□□□□ -0.6
RAB4AP20338 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.28□□□□□ -0.6
RAB4AP20338 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.28□□□□□ -0.6
RAB4AP20338 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 FAM90A12P-201ENST00000519497 2375 ntBASIC11.28□□□□□ -0.6
RAB4AP20338 FAM90A24P-201ENST00000520792 2369 ntBASIC11.28□□□□□ -0.6
RAB4AP20338 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RAB4AP20338 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB4AP20338 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
RAB4AP20338 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB4AP20338 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB4AP20338 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.27□□□□□ -0.6
RAB4AP20338 AL118505.1-201ENST00000619370 1932 ntBASIC11.27□□□□□ -0.6
RAB4AP20338 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB4AP20338 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB4AP20338 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB4AP20338 AC012508.2-201ENST00000567613 1472 ntBASIC11.27□□□□□ -0.6
RAB4AP20338 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
RAB4AP20338 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
RAB4AP20338 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RAB4AP20338 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
RAB4AP20338 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RAB4AP20338 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RAB4AP20338 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RAB4AP20338 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB4AP20338 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RAB4AP20338 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB4AP20338 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB4AP20338 EEF1DP4-201ENST00000446006 880 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB4AP20338 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB4AP20338 AC012640.2-201ENST00000561606 901 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 MIR3652-201ENST00000579335 131 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 AC073389.1-201ENST00000595595 795 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB4AP20338 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 AP000437.1-201ENST00000624057 2085 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
RAB4AP20338 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB4AP20338 AC215219.1-201ENST00000400706 1817 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
RAB4AP20338 CYP4F24P-201ENST00000586049 1580 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 AL607033.1-201ENST00000623900 1599 ntBASIC11.27□□□□□ -0.61
RAB4AP20338 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB4AP20338 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB4AP20338 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms