Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CD58P19256 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.71■□□□□ 0.11
CD58P19256 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.71■□□□□ 0.11
CD58P19256 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CD58P19256 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CD58P19256 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.71■□□□□ 0.11
CD58P19256 BTBD6P1-201ENST00000412176 1267 ntBASIC15.71■□□□□ 0.11
CD58P19256 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.71■□□□□ 0.11
CD58P19256 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.71■□□□□ 0.11
CD58P19256 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
CD58P19256 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.71■□□□□ 0.11
CD58P19256 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 AC100827.2-201ENST00000563214 1194 ntBASIC15.71■□□□□ 0.11
CD58P19256 AC009955.4-201ENST00000597192 544 ntBASIC15.71■□□□□ 0.11
CD58P19256 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.71■□□□□ 0.11
CD58P19256 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CD58P19256 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 AC011498.7-201ENST00000624986 2027 ntBASIC15.71■□□□□ 0.11
CD58P19256 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.71■□□□□ 0.11
CD58P19256 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CD58P19256 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD58P19256 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CD58P19256 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD58P19256 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD58P19256 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD58P19256 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CD58P19256 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CD58P19256 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 AC244394.1-201ENST00000435000 1665 ntBASIC15.7■□□□□ 0.1
CD58P19256 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.7■□□□□ 0.1
CD58P19256 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.7■□□□□ 0.1
CD58P19256 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CD58P19256 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.7■□□□□ 0.1
CD58P19256 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.7■□□□□ 0.1
CD58P19256 BRWD1P1-201ENST00000401091 371 ntBASIC15.7■□□□□ 0.1
CD58P19256 AL354877.1-201ENST00000424412 413 ntBASIC15.7■□□□□ 0.1
CD58P19256 HSPB1P2-201ENST00000448722 546 ntBASIC15.7■□□□□ 0.1
CD58P19256 AL035414.1-201ENST00000451327 857 ntBASIC15.7■□□□□ 0.1
CD58P19256 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.7■□□□□ 0.1
CD58P19256 AC005730.2-201ENST00000564549 1184 ntBASIC15.7■□□□□ 0.1
CD58P19256 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.7■□□□□ 0.1
CD58P19256 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.7■□□□□ 0.1
CD58P19256 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.7■□□□□ 0.1
CD58P19256 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.7■□□□□ 0.1
CD58P19256 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.7■□□□□ 0.1
CD58P19256 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD58P19256 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.7■□□□□ 0.1
CD58P19256 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.7■□□□□ 0.1
CD58P19256 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD58P19256 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CD58P19256 TUBB1P2-201ENST00000422712 1306 ntBASIC15.69■□□□□ 0.1
CD58P19256 TUBB1P1-201ENST00000503144 1300 ntBASIC15.69■□□□□ 0.1
CD58P19256 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CD58P19256 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms