Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.79□□□□□ -0.04
VCLP18206 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.79□□□□□ -0.04
VCLP18206 RNA5SP412-201ENST00000516234 123 ntBASIC14.79□□□□□ -0.04
VCLP18206 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.79□□□□□ -0.04
VCLP18206 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.79□□□□□ -0.04
VCLP18206 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 AC023090.2-201ENST00000625182 2110 ntBASIC14.79□□□□□ -0.04
VCLP18206 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.78□□□□□ -0.04
VCLP18206 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VCLP18206 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.78□□□□□ -0.04
VCLP18206 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.78□□□□□ -0.04
VCLP18206 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 AC026954.1-201ENST00000429771 1293 ntBASIC14.78□□□□□ -0.04
VCLP18206 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.78□□□□□ -0.04
VCLP18206 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.78□□□□□ -0.04
VCLP18206 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.78□□□□□ -0.04
VCLP18206 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.78□□□□□ -0.04
VCLP18206 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
VCLP18206 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
VCLP18206 AC010328.2-201ENST00000597698 1111 ntBASIC14.78□□□□□ -0.04
VCLP18206 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 AC138466.3-201ENST00000619983 221 ntBASIC14.78□□□□□ -0.04
VCLP18206 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 PPT1-213ENST00000641319 2388 ntBASIC14.78□□□□□ -0.04
VCLP18206 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.78□□□□□ -0.04
VCLP18206 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCLP18206 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VCLP18206 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.77□□□□□ -0.04
VCLP18206 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
VCLP18206 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.77□□□□□ -0.04
VCLP18206 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.77□□□□□ -0.04
VCLP18206 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 AP001267.2-201ENST00000532619 2086 ntBASIC14.77□□□□□ -0.04
VCLP18206 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.77□□□□□ -0.04
VCLP18206 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCLP18206 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.77□□□□□ -0.05
VCLP18206 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VCLP18206 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms