Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 AC215219.1-201ENST00000400706 1817 ntBASIC12.78□□□□□ -0.36
CCL2P13500 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL2P13500 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
CCL2P13500 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCL2P13500 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
CCL2P13500 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL2P13500 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.77□□□□□ -0.37
CCL2P13500 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL2P13500 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL2P13500 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL2P13500 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL2P13500 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.77□□□□□ -0.37
CCL2P13500 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL2P13500 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.77□□□□□ -0.37
CCL2P13500 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 AC011498.7-201ENST00000624986 2027 ntBASIC12.77□□□□□ -0.37
CCL2P13500 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL2P13500 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL2P13500 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL2P13500 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 KHSRPP1-201ENST00000427983 1768 ntBASIC12.76□□□□□ -0.37
CCL2P13500 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL2P13500 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CCL2P13500 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL2P13500 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
CCL2P13500 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL2P13500 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL2P13500 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCL2P13500 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL2P13500 BRWD1P1-201ENST00000401091 371 ntBASIC12.76□□□□□ -0.37
CCL2P13500 AC010141.1-201ENST00000411585 623 ntBASIC12.76□□□□□ -0.37
CCL2P13500 BTBD6P1-201ENST00000412176 1267 ntBASIC12.76□□□□□ -0.37
CCL2P13500 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL2P13500 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL2P13500 GOLGA2P4-201ENST00000441462 777 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms